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Re: LAS 6.3: trouble with descriptor files
Hi Roland,
Sorry about that. I should have thought to post the xml file. Here it
is:
<?xml version='1.0' ?>
<!DOCTYPE spec SYSTEM "spec.dtd" [
<!ENTITY operations SYSTEM "operations.xml">
]>
<lasdata>
<institution name="Pacific Ocean Model"
url="http://rocky.umeoce.maine.edu"/>
<!-- Default properties for this server -->
<properties>
<ferret>
<land_type>shade
</land_type>
<fill_type>fill
</fill_type>
</ferret>
</properties>
<!-- Operations supported by this server -->
<operations
url="http://rocky.umeoce.maine.edu/las6-bin/LASserver.pl";>
&operations;
</operations>
<!-- Datasets provided by this server -->
<datasets>
<bio_cdf url="file:bio-g-80-99" doc="" name="Pacific Test">
<variables>
<no3 units="um/l" name="nitrate">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</no3>
<sio4 units="um/l" name="silicate">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</sio4>
<z1 units="um/l" name="small zoo.">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</z1>
<depth_at_sigma units="meters" name="depth at sigma layers">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_grid"/>
</depth_at_sigma>
<z2 units="um/l" name="large zoo.">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</z2>
<pco2s units="uatm" name="sea surface pco2">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_time_grid"/>
</pco2s>
<dd units="um/l" name="detrital n">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</dd>
<tco2 units="uatm" name="total co2">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</tco2>
<nh4 units="um/l" name="ammonia">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</nh4>
<dc14 units="ppm" name="delta c14">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</dc14>
<ddsi units="um/l" name="detrital si">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</ddsi>
<depth units="meter" name="bathymetry">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_grid"/>
</depth>
<CO2FLX units="uatm" name="air-sea co2 fluxes">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_time_grid"/>
</CO2FLX>
<s1 units="um/l" name="small phyto.">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</s1>
<s2 units="um/l" name="large phyto.">
<link match="/lasdata/grids/bio_cdf_xpos_ypos_zpos_time_grid"/>
</s2>
</variables>
</bio_cdf>
</datasets>
<grids>
<bio_cdf_xpos_ypos_zpos_time_grid>
<link match="/lasdata/axes/bio_cdf_xpos"/>
<link match="/lasdata/axes/bio_cdf_ypos"/>
<link match="/lasdata/axes/bio_cdf_zpos"/>
<link match="/lasdata/axes/bio_cdf_time"/>
</bio_cdf_xpos_ypos_zpos_time_grid>
<bio_cdf_xpos_ypos_zpos_grid>
<link match="/lasdata/axes/bio_cdf_xpos"/>
<link match="/lasdata/axes/bio_cdf_ypos"/>
<link match="/lasdata/axes/bio_cdf_zpos"/>
</bio_cdf_xpos_ypos_zpos_grid>
<bio_cdf_xpos_ypos_time_grid>
<link match="/lasdata/axes/bio_cdf_xpos"/>
<link match="/lasdata/axes/bio_cdf_ypos"/>
<link match="/lasdata/axes/bio_cdf_time"/>
</bio_cdf_xpos_ypos_time_grid>
<bio_cdf_xpos_ypos_grid>
<link match="/lasdata/axes/bio_cdf_xpos"/>
<link match="/lasdata/axes/bio_cdf_ypos"/>
</bio_cdf_xpos_ypos_grid>
</grids>
<axes>
<bio_cdf_xpos units="degree" type="x">
<arange start="100.5" step="2" size="95"/>
</bio_cdf_xpos>
<bio_cdf_ypos units="degree" type="y">
<v>-45.5
</v>
<v>-43.5
</v>
<v>-41.5
</v>
<v>-39.5
</v>
<v>-37.5
</v>
<v>-35.5
</v>
<v>-33.5
</v>
<v>-31.5
</v>
<v>-29.5
</v>
<v>-27.5
</v>
<v>-25.5
</v>
<v>-23.5
</v>
<v>-21.5
</v>
<v>-19.5072040557861
</v>
<v>-17.5776081085205
</v>
<v>-15.807469367981
</v>
<v>-14.2759695053101
</v>
<v>-13.0259695053101
</v>
<v>-12.0574684143066
</v>
<v>-11.3276081085205
</v>
<v>-10.7572040557861
</v>
<v>-10.2499980926514
</v>
<v>-9.74999809265137
</v>
<v>-9.24999809265137
</v>
<v>-8.74999809265137
</v>
<v>-8.24999809265137
</v>
<v>-7.74999856948853
</v>
<v>-7.24999856948853
</v>
<v>-6.74999856948853
</v>
<v>-6.24999856948853
</v>
<v>-5.74999856948853
</v>
<v>-5.24999856948853
</v>
<v>-4.74999856948853
</v>
<v>-4.24999856948853
</v>
<v>-3.7499988079071
</v>
<v>-3.2499988079071
</v>
<v>-2.7499988079071
</v>
<v>-2.2499988079071
</v>
<v>-1.74999892711639
</v>
<v>-1.24999892711639
</v>
<v>-0.749998986721039
</v>
<v>-0.249998986721039
</v>
<v>0.250000983476639
</v>
<v>0.750000953674316
</v>
<v>1.25000095367432
</v>
<v>1.75000095367432
</v>
<v>2.25000095367432
</v>
<v>2.75000095367432
</v>
<v>3.25000095367432
</v>
<v>3.75000095367432
</v>
<v>4.25000095367432
</v>
<v>4.75000095367432
</v>
<v>5.25000095367432
</v>
<v>5.75000095367432
</v>
<v>6.25000095367432
</v>
<v>6.75000095367432
</v>
<v>7.25000095367432
</v>
<v>7.75000095367432
</v>
<v>8.25000095367432
</v>
<v>8.75000095367432
</v>
<v>9.25000095367432
</v>
<v>9.75720596313477
</v>
<v>10.3276109695435
</v>
<v>11.0574703216553
</v>
<v>12.0259714126587
</v>
<v>13.2759714126587
</v>
<v>14.8074712753296
</v>
<v>16.5776119232178
</v>
<v>18.5072059631348
</v>
<v>20.5000019073486
</v>
<v>22.5000019073486
</v>
<v>24.5000019073486
</v>
<v>26.5000019073486
</v>
<v>28.5000019073486
</v>
<v>30.5000019073486
</v>
<v>32.5
</v>
<v>34.5
</v>
<v>36.5
</v>
<v>38.5
</v>
<v>40.5
</v>
<v>42.5
</v>
<v>44.5
</v>
<v>46.5
</v>
<v>48.5
</v>
<v>50.5
</v>
<v>52.5
</v>
<v>54.5
</v>
<v>56.5
</v>
<v>58.5
</v>
<v>60.5
</v>
<v>62.5
</v>
<v>64.5
</v>
</bio_cdf_ypos>
<bio_cdf_zpos units="meter" type="z">
<v>10
</v>
<v>20
</v>
<v>30
</v>
<v>40
</v>
<v>50
</v>
<v>60
</v>
<v>70
</v>
<v>80
</v>
<v>90
</v>
<v>100
</v>
<v>112
</v>
<v>126
</v>
<v>142
</v>
<v>160
</v>
<v>180
</v>
<v>202
</v>
<v>226
</v>
<v>252
</v>
<v>280
</v>
<v>310
</v>
<v>342
</v>
<v>376
</v>
<v>412
</v>
<v>450
</v>
<v>490
</v>
<v>532
</v>
<v>576
</v>
<v>622
</v>
<v>670
</v>
<v>722
</v>
<v>784
</v>
<v>865
</v>
<v>986
</v>
<v>1175
</v>
<v>1473
</v>
<v>1924
</v>
<v>2573
</v>
<v>3436
</v>
<v>4421
</v>
<v>5500
</v>
</bio_cdf_zpos>
<bio_cdf_time units="month" type="t">
<v> Mean: January 1980
</v>
<v> Mean: February 1980
</v>
<v> Mean: March 1980
</v>
<v> Mean: April 1980
</v>
<v> Mean: May 1980
</v>
<v> Mean: June 1980
</v>
<v> Mean: July 1980
</v>
<v> Mean: August 1980
</v>
<v> Mean: September 1980
</v>
<v> Mean: October 1980
</v>
<v> Mean: November 1980
</v>
<v> Mean: December 1980
</v>
<v> Mean: January 1981
</v>
<v> Mean: February 1981
</v>
<v> Mean: March 1981
</v>
<v> Mean: April 1981
</v>
<v> Mean: May 1981
</v>
<v> Mean: June 1981
</v>
<v> Mean: July 1981
</v>
<v> Mean: August 1981
</v>
<v> Mean: September 1981
</v>
<v> Mean: October 1981
</v>
<v> Mean: November 1981
</v>
<v> Mean: December 1981
</v>
<v> Mean: January 1982
</v>
<v> Mean: February 1982
</v>
<v> Mean: March 1982
</v>
<v> Mean: April 1982
</v>
<v> Mean: May 1982
</v>
<v> Mean: June 1982
</v>
<v> Mean: July 1982
</v>
<v> Mean: August 1982
</v>
<v> Mean: September 1982
</v>
<v> Mean: October 1982
</v>
<v> Mean: November 1982
</v>
<v> Mean: December 1982
</v>
<v> Mean: January 1983
</v>
<v> Mean: February 1983
</v>
<v> Mean: March 1983
</v>
<v> Mean: April 1983
</v>
<v> Mean: May 1983
</v>
<v> Mean: June 1983
</v>
<v> Mean: July 1983
</v>
<v> Mean: August 1983
</v>
<v> Mean: September 1983
</v>
<v> Mean: October 1983
</v>
<v> Mean: November 1983
</v>
<v> Mean: December 1983
</v>
<v> Mean: January 1984
</v>
<v> Mean: February 1984
</v>
<v> Mean: March 1984
</v>
<v> Mean: April 1984
</v>
<v> Mean: May 1984
</v>
<v> Mean: June 1984
</v>
<v> Mean: July 1984
</v>
<v> Mean: August 1984
</v>
<v> Mean: September 1984
</v>
<v> Mean: October 1984
</v>
<v> Mean: November 1984
</v>
<v> Mean: December 1984
</v>
<v> Mean: January 1985
</v>
<v> Mean: February 1985
</v>
<v> Mean: March 1985
</v>
<v> Mean: April 1985
</v>
<v> Mean: May 1985
</v>
<v> Mean: June 1985
</v>
<v> Mean: July 1985
</v>
<v> Mean: August 1985
</v>
<v> Mean: September 1985
</v>
<v> Mean: October 1985
</v>
<v> Mean: November 1985
</v>
<v> Mean: December 1985
</v>
<v> Mean: January 1986
</v>
<v> Mean: February 1986
</v>
<v> Mean: March 1986
</v>
<v> Mean: April 1986
</v>
<v> Mean: May 1986
</v>
<v> Mean: June 1986
</v>
<v> Mean: July 1986
</v>
<v> Mean: August 1986
</v>
<v> Mean: September 1986
</v>
<v> Mean: October 1986
</v>
<v> Mean: November 1986
</v>
<v> Mean: December 1986
</v>
<v> Mean: January 1987
</v>
<v> Mean: February 1987
</v>
<v> Mean: March 1987
</v>
<v> Mean: April 1987
</v>
<v> Mean: May 1987
</v>
<v> Mean: June 1987
</v>
<v> Mean: July 1987
</v>
<v> Mean: August 1987
</v>
<v> Mean: September 1987
</v>
<v> Mean: October 1987
</v>
<v> Mean: November 1987
</v>
<v> Mean: December 1987
</v>
<v> Mean: January 1988
</v>
<v> Mean: February 1988
</v>
<v> Mean: March 1988
</v>
<v> Mean: April 1988
</v>
<v> Mean: May 1988
</v>
<v> Mean: June 1988
</v>
<v> Mean: July 1988
</v>
<v> Mean: August 1988
</v>
<v> Mean: September 1988
</v>
<v> Mean: October 1988
</v>
<v> Mean: November 1988
</v>
<v> Mean: December 1988
</v>
<v> Mean: January 1989
</v>
<v> Mean: February 1989
</v>
<v> Mean: March 1989
</v>
<v> Mean: April 1989
</v>
<v> Mean: May 1989
</v>
<v> Mean: June 1989
</v>
<v> Mean: July 1989
</v>
<v> Mean: August 1989
</v>
<v> Mean: September 1989
</v>
<v> Mean: October 1989
</v>
<v> Mean: November 1989
</v>
<v> Mean: December 1989
</v>
<v> Mean: January 1990
</v>
<v> Mean: February 1990
</v>
<v> Mean: March 1990
</v>
<v> Mean: April 1990
</v>
<v> Mean: May 1990
</v>
<v> Mean: June 1990
</v>
<v> Mean: July 1990
</v>
<v> Mean: August 1990
</v>
<v> Mean: September 1990
</v>
<v> Mean: October 1990
</v>
<v> Mean: November 1990
</v>
<v> Mean: December 1990
</v>
<v> Mean: January 1991
</v>
<v> Mean: February 1991
</v>
<v> Mean: March 1991
</v>
<v> Mean: April 1991
</v>
<v> Mean: May 1991
</v>
<v> Mean: June 1991
</v>
<v> Mean: July 1991
</v>
<v> Mean: August 1991
</v>
<v> Mean: September 1991
</v>
<v> Mean: October 1991
</v>
<v> Mean: November 1991
</v>
<v> Mean: December 1991
</v>
<v> Mean: January 1992
</v>
<v> Mean: February 1992
</v>
<v> Mean: March 1992
</v>
<v> Mean: April 1992
</v>
<v> Mean: May 1992
</v>
<v> Mean: June 1992
</v>
<v> Mean: July 1992
</v>
<v> Mean: August 1992
</v>
<v> Mean: September 1992
</v>
<v> Mean: October 1992
</v>
<v> Mean: November 1992
</v>
<v> Mean: December 1992
</v>
<v> Mean: January 1993
</v>
<v> Mean: February 1993
</v>
<v> Mean: March 1993
</v>
<v> Mean: April 1993
</v>
<v> Mean: May 1993
</v>
<v> Mean: June 1993
</v>
<v> Mean: July 1993
</v>
<v> Mean: August 1993
</v>
<v> Mean: September 1993
</v>
<v> Mean: October 1993
</v>
<v> Mean: November 1993
</v>
<v> Mean: December 1993
</v>
<v> Mean: January 1994
</v>
<v> Mean: February 1994
</v>
<v> Mean: March 1994
</v>
<v> Mean: April 1994
</v>
<v> Mean: May 1994
</v>
<v> Mean: June 1994
</v>
<v> Mean: July 1994
</v>
<v> Mean: August 1994
</v>
<v> Mean: September 1994
</v>
<v> Mean: October 1994
</v>
<v> Mean: November 1994
</v>
<v> Mean: December 1994
</v>
<v> Mean: January 1995
</v>
<v> Mean: February 1995
</v>
<v> Mean: March 1995
</v>
<v> Mean: April 1995
</v>
<v> Mean: May 1995
</v>
<v> Mean: June 1995
</v>
<v> Mean: July 1995
</v>
<v> Mean: August 1995
</v>
<v> Mean: September 1995
</v>
<v> Mean: October 1995
</v>
<v> Mean: November 1995
</v>
<v> Mean: December 1995
</v>
<v> Mean: January 1996
</v>
<v> Mean: February 1996
</v>
<v> Mean: March 1996
</v>
<v> Mean: April 1996
</v>
<v> Mean: May 1996
</v>
<v> Mean: June 1996
</v>
<v> Mean: July 1996
</v>
<v> Mean: August 1996
</v>
<v> Mean: September 1996
</v>
<v> Mean: October 1996
</v>
<v> Mean: November 1996
</v>
<v> Mean: December 1996
</v>
<v> Mean: January 1997
</v>
<v> Mean: February 1997
</v>
<v> Mean: March 1997
</v>
<v> Mean: April 1997
</v>
<v> Mean: May 1997
</v>
<v> Mean: June 1997
</v>
<v> Mean: July 1997
</v>
<v> Mean: August 1997
</v>
<v> Mean: September 1997
</v>
<v> Mean: October 1997
</v>
<v> Mean: November 1997
</v>
<v> Mean: December 1997
</v>
<v> Mean: January 1998
</v>
<v> Mean: February 1998
</v>
<v> Mean: March 1998
</v>
<v> Mean: April 1998
</v>
<v> Mean: May 1998
</v>
<v> Mean: June 1998
</v>
<v> Mean: July 1998
</v>
<v> Mean: August 1998
</v>
<v> Mean: September 1998
</v>
<v> Mean: October 1998
</v>
<v> Mean: November 1998
</v>
<v> Mean: December 1998
</v>
<v> Mean: January 1999
</v>
<v> Mean: February 1999
</v>
<v> Mean: March 1999
</v>
<v> Mean: April 1999
</v>
<v> Mean: May 1999
</v>
<v> Mean: June 1999
</v>
<v> Mean: July 1999
</v>
<v> Mean: August 1999
</v>
<v> Mean: September 1999
</v>
<v> Mean: October 1999
</v>
<v> Mean: November 1999
</v>
</bio_cdf_time>
</axes>
</lasdata>
Thanks,
Steve
______________________________________________________________________
Steve Cousins, Ocean Modeling Group Email: cousins@umit.maine.edu
Marine Sciences, 208 Libby Hall http://rocky.umeoce.maine.edu
Univ. of Maine, Orono, ME 04469 Phone: (207) 581-4302
On Tue, 18 May 2004, Roland Schweitzer wrote:
> Steve,
>
> I'm sorry, but I cannot quite see what's wrong from just the error
> message. I think the best way to track down the problem would be to
> work with a copy of your configuration. Can you make the XML
> configuration available either by ftp, mailing it to the list or by
> turning on the LASinfo.pl script and pointing us to your LASserver.pl
> URL. Instructions for LASinfo.pl are at:
> http://ferret.pmel.noaa.gov/Ferret/LAS/Documentation/manual/utilities.html#LASinfo.
>
> Thanks,
> Roland
>
> Steve Cousins wrote:
>
> >Hi LASers,
> >
> >I'm having a problem getting LAS 6.3 to work with descriptor files. The
> >descriptor file works fine in Ferret. I've tried specifying the
> >descriptor file either with an explicit path or with just the file name
> >(no directory) and the file is in the FER_DESCR path.
> >
> >I created the XML for this data set using addXml.pl on the first file of
> >the series and then editing the xml file to change the file name (to point
> >to the descriptor file instead of the netCDF file) and the time axis.
> >This has always worked before.
> >
> >Running make works fine.
> >
> >In LAS I can bring up the Datasets, Variables, and Constraints. But when I
> >click "Next" to bring up the output the error that I get is:
> >
> >=========================
> >LAS Error
> >
> > The following error message was received from LAS:
> >
> > Can't find match target '/lasdata/datasets/bio_cdf/variables/CO2FLX' at
> >'bio_cdf' at ../xml/perl/LAS.pm line 613
> >=========================
> >
> >Has anyone else run into this? Any ideas?
> >
> >Thanks very much,
> >
> >Steve
> >______________________________________________________________________
> > Steve Cousins, Ocean Modeling Group Email: cousins@umit.maine.edu
> > Marine Sciences, 208 Libby Hall http://rocky.umeoce.maine.edu
> > Univ. of Maine, Orono, ME 04469 Phone: (207) 581-4302
> >
> >
> >
>
>
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