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Re: [las_users] ANNOUNCEMENT: LAS v7.2 with vectors and multiple variable selection is now available
Roland Schweitzer wrote:
> Hi,
>
> John has uncovered a bug in the release. The testing code does indeed
> point to the old conf/server location. We'll bundle up a new tar with
> the fix, but in the meantime you'll have to edit in the correct
> location and recompile.
>
> Find $LAS_HOME/test/LASTest/src/LASTest.java
>
> and edit in the correct location in on line 186.
>
> Then "ant compile" should get the thing built and usable.
Alright, I did that. But I still get an error:
/free/las.v7.2/test/LASTest# ant lastest -Df=1
Buildfile: build.xml
init:
compileTest:
lastest:
[java] ==== LAS test: Are the FTDS URLs working? =================
[java] ---- Check dataset:
http://abalone.nodc.noaa.gov:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl
[java] DConnect FileNotFound; retry open (1)
http://abalone.nodc.noaa.gov:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
[java] DConnect FileNotFound; retry open (2)
http://abalone.nodc.noaa.gov:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
[java] DConnect FileNotFound; retry open (3)
http://abalone.nodc.noaa.gov:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
[java] An error was returned by the remote server.
[java] Connection cannot be opened
[java] java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
[java] at java.util.ArrayList.rangeCheck(ArrayList.java:571)
[java] at java.util.ArrayList.get(ArrayList.java:349)
[java] at LASDatasetTester.testFTDS(Unknown Source)
[java] at LASTest.testFTDS(Unknown Source)
[java] at LASTest.runTest(Unknown Source)
[java] at LASTest.main(Unknown Source)
[java] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
Method)
[java] at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
[java] at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[java] at java.lang.reflect.Method.invoke(Method.java:616)
[java] at
org.apache.tools.ant.taskdefs.ExecuteJava.run(ExecuteJava.java:202)
[java] at
org.apache.tools.ant.taskdefs.ExecuteJava.execute(ExecuteJava.java:134)
[java] at org.apache.tools.ant.taskdefs.Java.run(Java.java:710)
[java] at
org.apache.tools.ant.taskdefs.Java.executeJava(Java.java:178)
[java] at org.apache.tools.ant.taskdefs.Java.execute(Java.java:84)
[java] at
org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275)
[java] at org.apache.tools.ant.Task.perform(Task.java:364)
[java] at org.apache.tools.ant.Target.execute(Target.java:341)
[java] at org.apache.tools.ant.Target.performTasks(Target.java:369)
[java] at
org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216)
[java] at
org.apache.tools.ant.Project.executeTarget(Project.java:1185)
[java] at
org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:40)
[java] at
org.apache.tools.ant.Project.executeTargets(Project.java:1068)
[java] at org.apache.tools.ant.Main.runBuild(Main.java:668)
[java] at org.apache.tools.ant.Main.startAnt(Main.java:187)
[java] at
org.apache.tools.ant.launch.Launcher.run(Launcher.java:246)
[java] at
org.apache.tools.ant.launch.Launcher.main(Launcher.java:67)
BUILD SUCCESSFUL
Total time: 3 seconds
> Roland
>
> On 12/21/2010 10:26 AM, John Relph wrote:
>> Roland Schweitzer wrote:
>>> Hi Folks,
>>>
>>> We are pleased to announce the release of LAS 7.2
>>> (ftp://ftp.pmel.noaa.gov/pub/las/las.v7.2.tar.gz). This version
>>> includes new features for vector variables and new products and
>>> capabilities for multiple variables. The release notes
>>> (http://ferret.pmel.noaa.gov/LAS/documentation/las-release-notes-7-2/)
>>> have several example plots showing off the new features.
>>>
>>> Please upgrade to this release and send your feedback to the list.
>> Roland,
>>
>> I have attempted to upgrade to LAS v7.2 but when I attempt to test the
>> F-TDS installation I see an error:
>>
>> /free/las.v7.2# cd test/LASTest/
>> /free/las.v7.2/test/LASTest# !ant
>> ant lastest -Df=1
>> Buildfile: build.xml
>>
>> init:
>> [mkdir] Created dir:
>> /stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/build
>> [mkdir] Created dir:
>> /stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/las
>> [jar] Building jar:
>> /stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/las/las.jar
>>
>> compileTest:
>> [javac] Compiling 6 source files to
>> /stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/build
>>
>> lastest:
>> [java] java.io.FileNotFoundException:
>> /stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/../../conf/server/operationsV7.xml
>>
>> (No such file or directory)
>> [java] at java.io.FileInputStream.open(Native Method)
>> [java] at
>> java.io.FileInputStream.<init>(FileInputStream.java:137)
>> [java] at
>> java.io.FileInputStream.<init>(FileInputStream.java:96)
>> [java] at
>> sun.net.www.protocol.file.FileURLConnection.connect(FileURLConnection.java:87)
>>
>> [java] at
>> sun.net.www.protocol.file.FileURLConnection.getInputStream(FileURLConnection.java:178)
>>
>> [java] at
>> org.apache.xerces.impl.XMLEntityManager.setupCurrentEntity(Unknown
>> Source)
>> [java] at
>> org.apache.xerces.impl.XMLVersionDetector.determineDocVersion(Unknown
>> Source)
>> [java] at
>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
>> [java] at
>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
>> [java] at org.apache.xerces.parsers.XMLParser.parse(Unknown
>> Source)
>> [java] at
>> org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source)
>> [java] at
>> org.apache.xerces.jaxp.SAXParserImpl$JAXPSAXParser.parse(Unknown Source)
>> [java] at org.jdom.input.SAXBuilder.build(SAXBuilder.java:453)
>> [java] at org.jdom.input.SAXBuilder.build(SAXBuilder.java:810)
>> [java] at org.jdom.input.SAXBuilder.build(SAXBuilder.java:789)
>> [java] at
>> gov.noaa.pmel.tmap.las.jdom.JDOMUtils.XML2JDOM(JDOMUtils.java:80)
>> [java] at LASTest.<init>(Unknown Source)
>> [java] at LASTest.main(Unknown Source)
>> [java] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
>> Method)
>> [java] at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>>
>> [java] at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>
>> [java] at java.lang.reflect.Method.invoke(Method.java:616)
>> [java] at
>> org.apache.tools.ant.taskdefs.ExecuteJava.run(ExecuteJava.java:202)
>> [java] at
>> org.apache.tools.ant.taskdefs.ExecuteJava.execute(ExecuteJava.java:134)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.run(Java.java:710)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.executeJava(Java.java:178)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.execute(Java.java:84)
>> [java] at
>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275)
>> [java] at org.apache.tools.ant.Task.perform(Task.java:364)
>> [java] at org.apache.tools.ant.Target.execute(Target.java:341)
>> [java] at
>> org.apache.tools.ant.Target.performTasks(Target.java:369)
>> [java] at
>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216)
>> [java] at
>> org.apache.tools.ant.Project.executeTarget(Project.java:1185)
>> [java] at
>> org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:40)
>>
>> [java] at
>> org.apache.tools.ant.Project.executeTargets(Project.java:1068)
>> [java] at org.apache.tools.ant.Main.runBuild(Main.java:668)
>> [java] at org.apache.tools.ant.Main.startAnt(Main.java:187)
>> [java] at
>> org.apache.tools.ant.launch.Launcher.run(Launcher.java:246)
>> [java] at
>> org.apache.tools.ant.launch.Launcher.main(Launcher.java:67)
>>
>> [java] ==== LAS test: Are the FTDS URLs working? =================
>> [java] ---- Check dataset:
>> http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl
>>
>> [java] DConnect FileNotFound; retry open (1)
>> http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
>>
>> [java] DConnect FileNotFound; retry open (2)
>> http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
>>
>> [java] DConnect FileNotFound; retry open (3)
>> http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
>>
>> [java] An error was returned by the remote server.
>> [java] Connection cannot be opened
>> [java] java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
>> [java] at java.util.ArrayList.rangeCheck(ArrayList.java:571)
>> [java] at java.util.ArrayList.get(ArrayList.java:349)
>> [java] at LASDatasetTester.testFTDS(Unknown Source)
>> [java] at LASTest.testFTDS(Unknown Source)
>> [java] at LASTest.runTest(Unknown Source)
>> [java] at LASTest.main(Unknown Source)
>> [java] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
>> Method)
>> [java] at
>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>>
>> [java] at
>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>>
>> [java] at java.lang.reflect.Method.invoke(Method.java:616)
>> [java] at
>> org.apache.tools.ant.taskdefs.ExecuteJava.run(ExecuteJava.java:202)
>> [java] at
>> org.apache.tools.ant.taskdefs.ExecuteJava.execute(ExecuteJava.java:134)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.run(Java.java:710)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.executeJava(Java.java:178)
>> [java] at
>> org.apache.tools.ant.taskdefs.Java.execute(Java.java:84)
>> [java] at
>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275)
>> [java] at org.apache.tools.ant.Task.perform(Task.java:364)
>> [java] at org.apache.tools.ant.Target.execute(Target.java:341)
>> [java] at
>> org.apache.tools.ant.Target.performTasks(Target.java:369)
>> [java] at
>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216)
>> [java] at
>> org.apache.tools.ant.Project.executeTarget(Project.java:1185)
>> [java] at
>> org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:40)
>>
>> [java] at
>> org.apache.tools.ant.Project.executeTargets(Project.java:1068)
>> [java] at org.apache.tools.ant.Main.runBuild(Main.java:668)
>> [java] at org.apache.tools.ant.Main.startAnt(Main.java:187)
>> [java] at
>> org.apache.tools.ant.launch.Launcher.run(Launcher.java:246)
>> [java] at
>> org.apache.tools.ant.launch.Launcher.main(Launcher.java:67)
>>
>>
>> BUILD SUCCESSFUL
>> Total time: 7 seconds
>>
>> The script seems to be looking in the wrong place for
>> "operationsV7.xml".
>>
>> -- John
>>
>>> Roland
>>>
>>>
>>> LAS Release Notes (7.2)
>>>
>>> by roland — last modified 2010-12-16 19:38
>>>
>>> The current release is LAS 7.2 (December 2010)
>>>
>>> This version of LAS requires Ferret 6.65.
>>>
>>> * *
>>>
>>>
>>> Important Housekeeping Detail
>>>
>>> *The server configuration directory will now be installed under
>>> $TOMCAT_HOME/content/las/ instead of the the directory where you
>>> unpack your LAS and run configure. You'll need to locate this
>>> directory and apply your changes to the configuration there after the
>>> install.*
>>>
>>>
>>> Major New Features
>>>
>>>
>>> Multiple Variable Selection
>>>
>>> LAS now supports selection of more than one variable from the same
>>> data set on the main interface. When more than one variable is
>>> selected you can make new visualizations appropriate for the number of
>>> variables you have chosen.
>>>
>>> 1. Time series line plots will include all of the variables
>>> selected with multiple axis scales and line colors.
>>> 2. You can make property-property scatter plots of two different
>>> variables.
>>> 3. You can also color the symbols in a property-property plot by
>>> the value of a third variable.
>>>
>>>
>>> Vector Variables
>>>
>>> 1. Vector variables and vector plots are now supported (in XY, XT
>>> and YT dimensions).
>>> 2. Vectors can be plotted in the vizGal comparison tool and the
>>> difference between to vector variable can be plotted in XY using
>>> vizGal.
>>> 3. vizGal itself has new layout and some new features that allow
>>> comparisons along any axis. For example, you can make time
>>> series plots with a different point in XY selected in each of
>>> the panels.
>>> 4. The addXML utility automatically detects and configures many
>>> vector variable when scanning a THREDDS catalog or other netCDF
>>> data source with containing multiple variables.
>>>
>>
>
>
--
John Relph <John.Relph@xxxxxxxx>
ISSO, NOAA/NESDIS/National Oceanographic Data Center
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