Re: [las_users] ANNOUNCEMENT: LAS v7.2 with vectors and multiple variable selection is now available

To: Roland Schweitzer <Roland.Schweitzer@xxxxxxxx>
Subject: Re: [las_users] ANNOUNCEMENT: LAS v7.2 with vectors and multiple variable selection is now available
From: John Relph <John.Relph@xxxxxxxx>
Date: Tue, 21 Dec 2010 11:26:26 -0500
Cc: las_users <oar.pmel.las_users@xxxxxxxx>
In-reply-to: <4D0B946D.3060708@xxxxxxxx>
References: <4D0B946D.3060708@xxxxxxxx>
Sender: owner-las_users@xxxxxxxx
User-agent: Thunderbird 2.0.0.24 (X11/20101201)

Roland Schweitzer wrote:
> Hi Folks,
>
> We are pleased to announce the release of LAS 7.2
> (ftp://ftp.pmel.noaa.gov/pub/las/las.v7.2.tar.gz).  This version
> includes new features for vector variables and new products and
> capabilities for multiple variables.  The release notes
> (http://ferret.pmel.noaa.gov/LAS/documentation/las-release-notes-7-2/)
> have several example plots showing off the new features.
>
> Please upgrade to this release and send your feedback to the list.

Roland,

I have attempted to upgrade to LAS v7.2 but when I attempt to test the
F-TDS installation I see an error:

/free/las.v7.2# cd test/LASTest/
/free/las.v7.2/test/LASTest# !ant
ant lastest -Df=1
Buildfile: build.xml

init:
    [mkdir] Created dir:
/stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/build
    [mkdir] Created dir:
/stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/las
      [jar] Building jar:
/stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/las/las.jar

compileTest:
    [javac] Compiling 6 source files to
/stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/build

lastest:
     [java] java.io.FileNotFoundException:
/stage/free-root/x86_64-redhat-el5/las.v7.2/test/LASTest/../../conf/server/operationsV7.xml
(No such file or directory)
     [java]     at java.io.FileInputStream.open(Native Method)
     [java]     at java.io.FileInputStream.<init>(FileInputStream.java:137)
     [java]     at java.io.FileInputStream.<init>(FileInputStream.java:96)
     [java]     at
sun.net.www.protocol.file.FileURLConnection.connect(FileURLConnection.java:87)
     [java]     at
sun.net.www.protocol.file.FileURLConnection.getInputStream(FileURLConnection.java:178)
     [java]     at
org.apache.xerces.impl.XMLEntityManager.setupCurrentEntity(Unknown Source)
     [java]     at
org.apache.xerces.impl.XMLVersionDetector.determineDocVersion(Unknown
Source)
     [java]     at
org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
     [java]     at
org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
     [java]     at org.apache.xerces.parsers.XMLParser.parse(Unknown Source)
     [java]     at
org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source)
     [java]     at
org.apache.xerces.jaxp.SAXParserImpl$JAXPSAXParser.parse(Unknown Source)
     [java]     at org.jdom.input.SAXBuilder.build(SAXBuilder.java:453)
     [java]     at org.jdom.input.SAXBuilder.build(SAXBuilder.java:810)
     [java]     at org.jdom.input.SAXBuilder.build(SAXBuilder.java:789)
     [java]     at
gov.noaa.pmel.tmap.las.jdom.JDOMUtils.XML2JDOM(JDOMUtils.java:80)
     [java]     at LASTest.<init>(Unknown Source)
     [java]     at LASTest.main(Unknown Source)
     [java]     at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
Method)
     [java]     at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [java]     at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [java]     at java.lang.reflect.Method.invoke(Method.java:616)
     [java]     at
org.apache.tools.ant.taskdefs.ExecuteJava.run(ExecuteJava.java:202)
     [java]     at
org.apache.tools.ant.taskdefs.ExecuteJava.execute(ExecuteJava.java:134)
     [java]     at org.apache.tools.ant.taskdefs.Java.run(Java.java:710)
     [java]     at
org.apache.tools.ant.taskdefs.Java.executeJava(Java.java:178)
     [java]     at org.apache.tools.ant.taskdefs.Java.execute(Java.java:84)
     [java]     at
org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275)
     [java]     at org.apache.tools.ant.Task.perform(Task.java:364)
     [java]     at org.apache.tools.ant.Target.execute(Target.java:341)
     [java]     at org.apache.tools.ant.Target.performTasks(Target.java:369)
     [java]     at
org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216)
     [java]     at
org.apache.tools.ant.Project.executeTarget(Project.java:1185)
     [java]     at
org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:40)
     [java]     at
org.apache.tools.ant.Project.executeTargets(Project.java:1068)
     [java]     at org.apache.tools.ant.Main.runBuild(Main.java:668)
     [java]     at org.apache.tools.ant.Main.startAnt(Main.java:187)
     [java]     at
org.apache.tools.ant.launch.Launcher.run(Launcher.java:246)
     [java]     at
org.apache.tools.ant.launch.Launcher.main(Launcher.java:67)

     [java] ==== LAS test: Are the FTDS URLs working? =================
     [java] ---- Check dataset:
http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl
     [java] DConnect FileNotFound; retry open (1)
http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
     [java] DConnect FileNotFound; retry open (2)
http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
     [java] DConnect FileNotFound; retry open (3)
http://localhost:8080/thredds/dodsC/las/id-60b17e7fa9/data_data.nodc.noaa.gov_thredds_dodsC_woa_WOA09_NetCDFdata_temperature_seasonal_5deg.nc.jnl.dds
     [java] An error was returned by the remote server.
     [java] Connection cannot be opened
     [java] java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
     [java]     at java.util.ArrayList.rangeCheck(ArrayList.java:571)
     [java]     at java.util.ArrayList.get(ArrayList.java:349)
     [java]     at LASDatasetTester.testFTDS(Unknown Source)
     [java]     at LASTest.testFTDS(Unknown Source)
     [java]     at LASTest.runTest(Unknown Source)
     [java]     at LASTest.main(Unknown Source)
     [java]     at sun.reflect.NativeMethodAccessorImpl.invoke0(Native
Method)
     [java]     at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [java]     at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [java]     at java.lang.reflect.Method.invoke(Method.java:616)
     [java]     at
org.apache.tools.ant.taskdefs.ExecuteJava.run(ExecuteJava.java:202)
     [java]     at
org.apache.tools.ant.taskdefs.ExecuteJava.execute(ExecuteJava.java:134)
     [java]     at org.apache.tools.ant.taskdefs.Java.run(Java.java:710)
     [java]     at
org.apache.tools.ant.taskdefs.Java.executeJava(Java.java:178)
     [java]     at org.apache.tools.ant.taskdefs.Java.execute(Java.java:84)
     [java]     at
org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275)
     [java]     at org.apache.tools.ant.Task.perform(Task.java:364)
     [java]     at org.apache.tools.ant.Target.execute(Target.java:341)
     [java]     at org.apache.tools.ant.Target.performTasks(Target.java:369)
     [java]     at
org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216)
     [java]     at
org.apache.tools.ant.Project.executeTarget(Project.java:1185)
     [java]     at
org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:40)
     [java]     at
org.apache.tools.ant.Project.executeTargets(Project.java:1068)
     [java]     at org.apache.tools.ant.Main.runBuild(Main.java:668)
     [java]     at org.apache.tools.ant.Main.startAnt(Main.java:187)
     [java]     at
org.apache.tools.ant.launch.Launcher.run(Launcher.java:246)
     [java]     at
org.apache.tools.ant.launch.Launcher.main(Launcher.java:67)


BUILD SUCCESSFUL
Total time: 7 seconds

The script seems to be looking in the wrong place for "operationsV7.xml".

        -- John

> Roland
>
>
>   LAS Release Notes (7.2)
>
> by roland — last modified 2010-12-16 19:38
>
> The current release is LAS 7.2 (December 2010)
>
> This version of LAS requires Ferret 6.65.
>
> * *
>
>
>     Important Housekeeping Detail
>
> *The server configuration directory will now be installed under
> $TOMCAT_HOME/content/las/ instead of the the directory where you
> unpack your LAS and run configure.  You'll need to locate this
> directory and apply your changes to the configuration there after the
> install.*
>
>
>     Major New Features
>
>
>       Multiple Variable Selection
>
> LAS now supports selection of more than one variable from the same
> data set on the main interface.  When more than one variable is
> selected you can make new visualizations appropriate for the number of
> variables you have chosen.
>
>    1. Time series line plots will include all of the variables
>       selected with multiple axis scales and line colors. 
>    2. You can make property-property scatter plots of two different
>       variables.
>    3. You can also color the symbols in a property-property plot by
>       the value of a third variable.
>
>
>       Vector Variables
>
>    1. Vector variables and vector plots are now supported (in XY, XT
>       and YT dimensions). 
>    2. Vectors can be plotted in the vizGal comparison tool and the
>       difference between to vector variable can be plotted in XY using
>       vizGal.
>    3. vizGal itself has new layout and some new features that allow
>       comparisons along any axis.   For example, you can make time
>       series plots with a different point in XY selected in each of
>       the panels.
>    4. The addXML utility automatically detects and configures many
>       vector variable when scanning a THREDDS catalog or other netCDF
>       data source with containing multiple variables.
>


-- 
John Relph <John.Relph@xxxxxxxx>
ISSO, NOAA/NESDIS/National Oceanographic Data Center

Follow-Ups:
- Re: [las_users] ANNOUNCEMENT: LAS v7.2 with vectors and multiple variable selection is now available
  - From: Roland Schweitzer

References:
- [las_users] ANNOUNCEMENT: LAS v7.2 with vectors and multiple variable selection is now available
  - From: Roland Schweitzer

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