Re: install difficulty with las_6_1_0_2.tar.gz

[Bob Yu <yuy@xxxxxxxxxxxxxxxxxx>]

Jon,

I turned using LINUX box to install the LAS. It took me quite a while to have all the perl modules installed.

However, now I have a problem that seems at the last step of the LAS configuration run. The configure doesn't recognize the web server that I have (you may try it at http://aquarius1.gsfc.nasa.gov).

Here is the error output:

         ......

Do you want to create or use a custom LAS directory?
This directory allows you to create custom user interface
and server extensions for LAS. Custom Ferret or Perl
scripts should be placed in this directory.
Use custom directory? [no] yes
Name of custom directory: [custom]
Created custom directory server/custom
Enter the full domain name of the Web Server (including port number if non standard): [aquarius1.gsfc.nasa.gov] aquarius1.gsfc.nasa.gov

If the Web server is running, I can make sure that it is a server
supported by LAS.
Is the server running? [yes]
Checking server...
[Tue Mar 11 10:00:08 2003] configure.pl: Forbidden at ./configure.pl line 978, <STDIN> line 13.

I use las_6_1_0_2.tar.gz file.  Any hints?

Bob
 
 
 

Jonathan Callahan wrote:

Bob,

The final message pretty much sums it up:

> Installation of following modules failed:
> DBD-mysql-2.1017
> netcdf-perl-1.2.1
>
> You need to install these modules by hand

The perl modules released with LAS are found in las/xml/perl/modules/.  You will
need to go into the following two subdirectories and follow the INSTALL
instructions to get these modules installed on your system.

DBD-mysql-2.1017/
netcdf-perl-1.2.1/

Most perl modules come with copious instructions and examples and you will
probably have to set a few flags to get things to compile properly on your system.

I hope it is straightforward for you.  If so, you might want to summarize what you
had to do and post it to the las_users email list.

Best of luck,

-- Jon

Bob Yu wrote:

> > Hi all,
>
> I currently tried to install LAS 6.1.02, but met some difficulties.
> Attached is some configure output. Would please someone  help me?  I use
> HP_UX  Machine.
>
> Thanks a lot!
>
> Bob
>
> ----- some of the configure outputs -----
> Searching for perl...
> Location of perl executable [/usr/contrib/bin/perl]:
>
> Starting Perl configuration script with /usr/contrib/bin/perl...
> Searching for required Perl modules...
>
> The following Perl modules haven't been installed:
>         DBD::mysql
>         NetCDF
> Do you want to build these modules (this can take up to thirty minutes)
> ? [yes] yes
>
> Choose installation type: [1] 2
>
> We'll need a user name, host and password to test
> installation of the MySQL DBD::mysql driver.
> Looking for mysqladmin program...
> MySQL user name: [root]
> MySQL password: []
> MySQL host: [localhost]
>
> Now building and installing Perl modules...
> Building and installing DBD-mysql-2.1017...
>         rm -rf mysql.c *.xsi ./blib Makefile.aperl
> blib/arch/auto/DBD/mysql/ext
> ralibs.all perlmain.c mon.out core core.*perl.*.? *perl.core so_locations
> pm_to
> _blib *.o *.a perl.exe mysql.bs mysql.bso mysql.def mysql.exp
>         mv Makefile Makefile.old > /dev/null 2>&1
> Note (probably harmless): No library found for -lmysqlclient
> Multiple copies of Driver.xst found in:
> /model/yuy/LAS/las6.0/xml/perl/install/
> lib/site_perl/5.6.1/PA-RISC1.1-thread-multi/auto/DBI
> /model/yuy/LAS/las6.0/xml/
> perl/install/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi/auto/DBI
> /model/yuy/LA
> S/las6.0/xml/perl/install/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi/auto/DBI
>
> at Makefile.PL line 286
> I will use the following settings for compiling and testing:
>
>   cflags        (mysql_config) = -I'/usr/local/mysql/include/mysql'
>   libs          (mysql_config) = -L/usr/local/mysql/lib/mysql -lmysqlclient
> -ln
> sl -lm
>   nocatchstderr (default     ) = 0
>   ssl           (guessed     ) = 0
>   testdb        (default     ) = test
>   testhost      (Users choice) = localhost
>   testpassword  (Users choice) = Bob  testuser      (Users choice) = root
>
> To change these settings, see 'perl Makefile.PL --help' and
> 'perldoc INSTALL'.
>
> Checking if your kit is complete...
> Warning: the following files are missing in your kit:
>         t/akmisc.t
>         t/dbdadmin.t
> Please inform the author.
> Using DBI 1.23 installed in
> /model/yuy/LAS/las6.0/xml/perl/install/lib/site_per
> l/5.6.1/PA-RISC1.1-thread-multi/auto/DBI
> Writing Makefile for DBD::mysql
> cp lib/DBD/mysql.pod blib/lib/DBD/mysql.pod
> cp lib/DBD/mysql/INSTALL.pod blib/lib/DBD/mysql/INSTALL.pod
> cp lib/DBD/mysql.pm blib/lib/DBD/mysql.pm
> cp lib/Mysql/Statement.pm blib/lib/Mysql/Statement.pm
> cp lib/Bundle/DBD/mysql.pm blib/lib/Bundle/DBD/mysql.pm
> cp lib/Mysql.pm blib/lib/Mysql.pm
>         gcc -c
> -I/model/yuy/LAS/las6.0/xml/perl/install/lib/site_perl/5.6.1/PA-
> RISC1.1-thread-multi/auto/DBI -I'/usr/local/mysql/include/mysql'
> -D_POSIX_C_SOU
> RCE=199506L -D_HPUX_SOURCE -L/lib/pa1.1 -DUINT32_MAX_BROKEN -mpa-risc-1-1
> -fPIC
>  -fno-strict-aliasing -I/usr/local/include -D_LARGEFILE_SOURCE
> -D_FILE_OFFSET_B
> ITS=64 -O    -DVERSION=\"2.1017\"  -DXS_VERSION=\"2.1017\" -fPIC
> -I/opt/perl/li
> b/5.6.1/PA-RISC1.1-thread-multi/CORE  dbdimp.c
> cc1: warning: changing search order for system directory
> "/usr/local/include"
> cc1: warning:   as it has already been specified as a non-system directory
> In file included from dbdimp.c:29:
> dbdimp.h:31:49: mysql.h: No such file or directory
> dbdimp.h:32:49: errmsg.h: No such file or directory
> In file included from dbdimp.c:29:
> dbdimp.h:116: parse error before "MYSQL"
> dbdimp.h:116: warning: no semicolon at end of struct or union
> dbdimp.h:122: parse error before '}' token
> dbdimp.h:151: parse error before "MYSQL_RES"
> dbdimp.h:151: warning: no semicolon at end of struct or union
> dbdimp.h:164: parse error before '}' token
> In file included from dbdimp.c:29:
> dbdimp.h:201: parse error before '*' token
> dbdimp.h:204: parse error before "MYSQL_RES"
> dbdimp.h:208: parse error before '*' token
> dbdimp.h:209: warning: data definition has no type or storage class
> dbdimp.c:128: parse error before '*' token
> dbdimp.c: In function `ParseParam':
> dbdimp.c:137: `slenPtr' undeclared (first use in this function)
> dbdimp.c:137: (Each undeclared identifier is reported only once
> dbdimp.c:137: for each function it appears in.)
>
> a lot more ...
>
> dbdimp.c:2018: dereferencing pointer to incomplete type
> dbdimp.c:2018: warning: passing arg 3 of `mysql_dr_error' makes pointer
> from in
> teger without a cast
> *** Error exit code 1
>
> a lot more ...
>
> NetCDF.xs: In function `XS_NetCDF_inquire':
> NetCDF.xs:1825: parse error before '(' token
> NetCDF.xs:1829: `rd' undeclared (first use in this function)
> NetCDF.xs:1829: (Each undeclared identifier is reported only once
> NetCDF.xs:1829: for each function it appears in.)
> NetCDF.xs:1829: warning: passing arg 4 of `ncinquire' from incompatible
> pointer
>  type
>
> NetCDF.xs: In function `XS_NetCDF_varinq':
> NetCDF.xs:1962: parse error before '(' token
> NetCDF.xs:1967: warning: passing arg 7 of `ncvarinq' from incompatible
> pointer
> type
> *** Error exit code 1
>
> Stop.
> Searching for required Perl modules...
>
> Installation of following modules failed:
> DBD-mysql-2.1017
> netcdf-perl-1.2.1
>
> You need to install these modules by hand

-- 
(Bob) Yunyue YU
Code 971, Goddard Space Flight Center
Greenbelt, MD 20771
(301)614-6850  yuy@nemo.gsfc.nasa.gov