Re: [las_users] LAS Error of JGOFS customisation.

[Jonathan Callahan <Jonathan.S.Callahan@xxxxxxxx>]

Takaya,

Cyndy or the JGOFS folks will have to answer this one. When we
originally worked with Cyndy to create an LAS front end to JGOFS data we
used the JGOFS 'list' command and that is the access mechanism used by
the code in the las/contrib/jgofs/ directory.


-- Jon


Namba Takaya wrote:

>Dear Jonathan
>
>I am sorry to trouble you with a stupid question.
>I has been confused with OPeNDAP/JGOFS Server and JGOFS
>server here and JGOFS Data system. Still I do not
>understand what JGOFS Sever is even though I had read some
>documents. I have DODS server in my linux with LAS.
>OPeNDAP/JGOFS Server looks dods server. However, do I need
>to install JGOFS server? Is that different from
>OpenDAP/JGOFS Server?
>
>Best Regards,
>
>Takaya Namba
>
>
>
>
>--- Jonathan Callahan <Jonathan.S.Callahan@noaa.gov> か
>らのメッセージ：
>  
>
>>All,
>>
>>To use the JGOFS server you will have to compile the
>>'list' JGOFS data
>>access client on your system. This is not done
>>automatically for you
>>when you install the JGOFS server from the
>>las/contrib/ area. (In fact,
>>the configuration information in las/contrib/jgofs/
>>is fairly old and is
>>probably out of date with respect to the current
>>list of datasets at JGOFS.)
>>
>>The source code for the JGOFS 'list' client is found
>>in
>>las/contrib/jgofs/data_access/. Please consult the
>>documentation there
>>or Cyndy Chandler for information on compiling it.
>>
>>Once compiled, this client application must live in
>>the las/server/bin/
>>directory. (Create this directory if it doesn't
>>already exist.)
>>
>>I hope this info helps you get local verions of the
>>JGOFS LAS User
>>Interface up and running.
>>
>>
>>-- Jon
>>
>>
>>Namba Takaya wrote:
>>
>>    
>>
>>>Dear Cyndy
>>>
>>>Thank you very much for your quick and kind reply.
>>>
>>>I could not find the "list" in server/bin. I cound
>>>      
>>>
>>not
>>    
>>
>>>fine "bin" directory either. Then I found the
>>>      
>>>
>>"list" in
>>
>>../xml/perl/modules/Template-Toolkit-2.14/templates/html.
>>    
>>
>>>I made  directory "bin" in "server/" and did copy
>>>      
>>>
>>"list'
>>>from there.
>>    
>>
>>>Does it matter? 
>>>
>>>And access the server.
>>>
>>>The result is as below,
>>>
>>>No data are available to be plotted
>>>The query submitted to the back end database
>>>      
>>>
>>returned no
>>    
>>
>>>valid data for this variable.  
>>>You may widen the search for data by expanding the
>>>      
>>>
>>region
>>    
>>
>>>of space or time. 
>>>You may also wish to remove any additional
>>>      
>>>
>>constraints
>>    
>>
>>>being applied. 
>>>Note that some databases include variables for
>>>      
>>>
>>which there
>>    
>>
>>>are very few, even zero, locations with valid data.
>>>      
>>>
>> 
>>    
>>
>>>This is because there are no proper JGOFS database
>>>      
>>>
>>but
>>    
>>
>>>only demo database "LAS_insitu_demo" in my sql
>>>      
>>>
>>server.
>>    
>>
>>>Is it right?
>>>
>>>Best Regards,
>>>
>>>Takaya Namba
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>--- Cyndy Chandler <cchandler@whoi.edu>
>>>      
>>>
>>からのメッセージ
>>    
>>
>>>：
>>> 
>>>
>>>      
>>>
>>>>Namba,
>>>>
>>>>and is there an executable file named "list" in
>>>>$LAS_ROOT/server/bin
>>>>
>>>>if not, that's the problem and you'll need to find
>>>>out where that file
>>>>is supposed to come from. I don't remember if it
>>>>gets built as part of
>>>>the custom JGOFS install or if you need to install
>>>>        
>>>>
>>a
>>    
>>
>>>>JGOFS server in
>>>>addition to LAS.
>>>>
>>>>- cyndy
>>>>
>>>>
>>>>
>>>>
>>>>Namba Takaya wrote:
>>>>
>>>>   
>>>>
>>>>        
>>>>
>>>>>Dear Sir
>>>>>
>>>>>I had tried to use the customisation of JGOFS as
>>>>>
>>>>>contrib>make jgofs
>>>>>
>>>>>then
>>>>>
>>>>>server>make
>>>>>
>>>>>The installation looks good.
>>>>>
>>>>>When I access the las server, the error comes as
>>>>>     
>>>>>
>>>>>          
>>>>>
>>>>below,
>>>>   
>>>>
>>>>        
>>>>
>>>>>LAS Error
>>>>>The following error message was received from
>>>>>          
>>>>>
>>LAS: 
>>    
>>
>>>>>Can't read file: bin/list at
>>>>>     
>>>>>
>>>>>          
>>>>>
>>>>../xml/perl/TMAP/TMAPJGOFS.pm
>>>>   
>>>>
>>>>        
>>>>
>>>>>line 213.
>>>>>
>>>>>Could you tell me how to solve this problem?
>>>>>
>>>>>Best Regards,
>>>>>
>>>>>Takaya Namba
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>--------------------------------------
>>>>>Know more about Breast Cancer
>>>>>http://pr.mail.yahoo.co.jp/pinkribbon/
>>>>>
>>>>>
>>>>>
>>>>>     
>>>>>
>>>>>          
>>>>>
>>>>-- 
>>>>~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>>>>Cyndy Chandler		| voice: (508) 289-2765
>>>>MS #43, WHOI		| Office hrs: M-F ~ 9-4
>>>>Woods Hole, MA  02543	| FAX: (508) 457-2161
>>>>cchandler@whoi.edu |
>>>>http://www.whoi.edu/people/cchandler
>>>>Ocean Carbon and Biogeochemistry Data Management
>>>>Office
>>>>Department of Marine Chemistry and Geochemistry
>>>>Woods Hole Oceanographic Institution
>>>>
>>>>
>>>>   
>>>>
>>>>        
>>>>
>>>--------------------------------------
>>>Know more about Breast Cancer
>>>http://pr.mail.yahoo.co.jp/pinkribbon/
>>>
>>> 
>>>
>>>      
>>>
>
>--------------------------------------
>Know more about Breast Cancer
>http://pr.mail.yahoo.co.jp/pinkribbon/
>
>  
>